Slide Set: Batch Processing for ImageJ

Version 1.5.0

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Technical note:

This update contains changes to the java package names. While this will not affect Slide Set function from the user perspective, developers interested in extending Slide Set or calling it from other ImageJ plugins and scripts should consult the API documentation for details.

Version 1.4.6

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Technical note:

Bio-Formats supports a greater variety of image types than base ImageJ. While ImageJ will fall back to a plugin (Bio-Formats in the standard Fiji distribution) if it does not recognize the image file type based on the file extension, some unsupported image types share file extensions with supported image types (ex. TIFF files with uncommon compression algorithms). ImageJ will fail to load these files, even if they can be loaded with the Bio-Formats plugin.

Using the Bio-Formats plugin as the default method for loading images avoids this issue, at the cost of slightly increased loading time for the first image. Image files containing multiple image sequences are currently not supported. If the Bio-Formats plugin fails to load an image file, SlideSet will fall back to base ImageJ for the ROI viewer or SCIFIO for most plugins, depending on whether ImageJ1- or ImageJ2-type data structures are required.

Version 1.4.5

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Version 1.4.4

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Version 1.4.3

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Version 1.4.2

SlideSet is now built with Java 8 for compatibility with the latest versions of ImageJ and ImageJ2. This version is will not run with older ImageJ versions built with Java 6. To check which version of Java is running, select Help > About ImageJ from the menu. If the Java version number is 1.6.X_XX, download a fresh installation of ImageJ to upgrade to a Java 8 version.

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Version 1.4.1

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Version 1.4.0

This version of Slide Set no longer loads the ImageJ2 user interface. While this creates some minor differences in how ROIs are selected, it should improve stability and performance. ROIs saved as SVG files should be fully compatible with the new ROI Editor. The previous version of the ROI Editor, using the ImageJ2 interface, is still available. See the documentation for more information.

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Version 1.3.1

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Version 1.3.0

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Version 1.2.1

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Version 1.2.0

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Version 1.1.2

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Version 1.1.1

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Version 1.1.0

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Version 1.0.0

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Version 0.5.0

Note: This version of Slide Set is a beta release.

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Version 0.4.4

Note: This version of Slide Set is a beta release.

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Version 0.4.3

Note: This version of Slide Set is a beta release.

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Version 0.4.2

Note: This version of Slide Set is a beta release.

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Version 0.4.1

Note: This version of Slide Set is a beta release.

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Version 0.4.0

Note: This version of Slide Set is a beta release.

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Version 0.3.1

Note: This version of Slide Set is a beta release.

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Version 0.3.0

Note: This version of Slide Set is a beta release.

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